1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCTGTATTTGGAAGCTGTTGCTATACTTCCTCAACTAGTACTTTTACAGAGAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattgtcctttatccaattttaaacattattataaattcgtctggttcatgttattgcatttgtgctggaaacagaattagcagttatgttataa...
species | Glycine max |
transcript | GLYMA18G35390.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAGEST: gi|7233537|gb|AW568942.1|AW568942
genomic: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
EST: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAGEST: gi|192316960|gb|FK010891.1|FK010891
genomic: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
EST: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAGEST: gi|11413728|gb|BF425739.1|BF425739
genomic: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
EST: CAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAACACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAGEST: gi|207837745|gb|GD810289.1|GD810289
genomic: CAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
EST: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAGEST: gi|22929555|gb|BU546694.1|BU546694
genomic: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
EST: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAGEST: gi|208098571|gb|GD894390.1|GD894390
genomic: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
EST: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGT GCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
genomic: GAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattg ... taaatgcagtGCATACAGAGCACTATACATTCTCAACTGGATCTACCGCTACTTTACCGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGTATTTGGAAGCTGTTGCTATACTTCCTCAACTAGTACTTTTACAGAGAACTAGAAATATTGACAATTTGACTGGACAATATGTCTTTCTTCTTGGGtaagatattgtcctttatccaattttaaacattattataaattcgtctggttcatgttattgcatttgtgctggaaacagaattagcagttatgttataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaacaga