1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
TTTTTTGATAACATCATGCGACATCATTCAAATCAATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgttttaatggtgattgttctgctattttgtcttgttttttaaattactatttacatagttctcacttataattttatgaattcttgttttcctgat...
species | Glycine max |
transcript | GLYMA17G18400.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAG AGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCAEST: gi|213620297|gb|DB961442.1|DB961442
genomic: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgtttta ... ggcagcacagAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
EST: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAG AGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCAEST: gi|209698652|gb|BW652465.1|BW652465
genomic: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgtttta ... ggcagcacagAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
EST: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAG AGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCAEST: gi|209707662|gb|BW676641.1|BW676641
genomic: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgtttta ... ggcagcacagAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
EST: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAG AGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCAEST: gi|213616607|gb|DB971188.1|DB971188
genomic: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgtttta ... ggcagcacagAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
EST: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAG AGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCAEST: gi|8401814|gb|BE057448.1|BE057448
genomic: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgtttta ... ggcagcacagAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
EST: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAG AGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
genomic: AATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgtttta ... ggcagcacagAGGCTAGTCCAAGCAACTCTGCAGCATCCATTATATCCATTGGATTATTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTTTGATAACATCATGCGACATCATTCAAATCAATATATGTTGGAGCGACTGAAAGATAAATCTCATGATTCCCCTGAGCAGgtatgttttaatggtgattgttctgctattttgtcttgttttttaaattactatttacatagttctcacttataattttatgaattcttgttttcctgat
- - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG