1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGATACAGCTGGCCAGGAAAGATTTAGAAGTCTTATTCCAAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatttagacctgctttctttcacctattccctccatgacgaattatattttcttgcagatttttcatttcaatataataatatattaatagtta...
species | Glycine max |
transcript | GLYMA17G16200.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAA GCCGTCAGACTTTCCTANACACATCAAAGTGGATTGAAGAGGTGCGCAGTGEST: gi|192323740|gb|FK016046.1|FK016046
genomic: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatt ... tgtgatatagGCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTG
EST: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAA GCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTGEST: gi|298166624|gb|HO010063.1|HO010063
genomic: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatt ... tgtgatatagGCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTG
EST: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAA GCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTGEST: gi|120529270|gb|EH257404.1|EH257404
genomic: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatt ... tgtgatatagGCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTG
EST: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAA GCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTGEST: gi|298177779|gb|HO027332.1|HO027332
genomic: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatt ... tgtgatatagGCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTG
EST: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAA GCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTGEST: gi|14991048|gb|BI316721.1|BI316721
genomic: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatt ... tgtgatatagGCCGTCAGACTTTCCTAAACACATCAAAGTGGATTGAAGAGGTGCGCAGTG
EST: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAA GCCGTCAAACTTTCCCTAAA-ACTTCAAA
genomic: AAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatt ... tgtgatatagGCCGTCAGACTTTCC-TAAACACATCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATACAGCTGGCCAGGAAAGATTTAGAAGTCTTATTCCAAGCTACATTAGGGACTCATCTGTTGCTGTCATTGTTTATGATGTTGCAAgtatgccatttagacctgctttctttcacctattccctccatgacgaattatattttcttgcagatttttcatttcaatataataatatattaatagtta
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