1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGGCGGCGAAACTCTTGGATTTGGTCCTCTTGTCCCCACTGAAAGTGAAAGATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAGgtaactaataaattaggtataattaaggctatgttggactttaactttttcaaaagcaggaaaaagaggaagcaaggaatggagaaagagagaagagaaa...
species | Glycine max |
transcript | GLYMA17G11330.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAG GGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTAAGAAAGAGAEST: gi|15287510|gb|BI471401.1|BI471401
genomic: GATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAGgtaactaata ... tatctttcagGGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTAAGAAAGAGA
EST: GATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAG GGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTAAGAAAGAGAEST: gi|254341374|gb|GR855102.1|GR855102
genomic: GATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAGgtaactaata ... tatctttcagGGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTAAGAAAGAGA
EST: GATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAG GGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTAAGAAAGAGA
genomic: GATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAGgtaactaata ... tatctttcagGGTTACAAGGAGAAGATTGTGGACATAAGAGAAGAAATTCTAAGAAAGAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGCGGCGAAACTCTTGGATTTGGTCCTCTTGTCCCCACTGAAAGTGAAAGATCTTTGATGGAAAGAGTCAGGCATGAGTTGAAGCATGAACTAAAACAGgtaactaataaattaggtataattaaggctatgttggactttaactttttcaaaagcaggaaaaagaggaagcaaggaatggagaaagagagaagagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC