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AAAGAATATTATATTGCGTGTGCCTGTGAAGAAATATATGCCCCTCCAAGTGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAGgtaagctgattctgctttttcttgcatatttgtgggcaaaggttcaccttttagtgtatggtgcaccctataaagtaataaataaagttataaaacttat...
species | Glycine max |
transcript | GLYMA17G09020.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAG GTGTTTTAGAGAATCTTGGAATTGAACCAGAAGTGGAAAGGATTGGCAAATEST: gi|5606068|gb|AI900166.1|AI900166
genomic: TGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAGgtaagctgat ... attctcttagGTGTTTTAGAGAATCTTGGAATTGAACCAGAAGTGGAAAGGATTGGCAAAT
EST: TGCATATTNTTCTTTGTTGGGATTGACTGTTCAAGCCCCATTTCTCAGAG GTGTTNTAGAGAATCTTGGAATTGAACCCAGA-GTGGGAAGCATNGCCAAAEST: gi|254319524|gb|GR829036.1|GR829036
genomic: TGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAGgtaagctgat ... attctcttagGTGTTTTAGAGAATCTTGGAATTGAACC-AGAAGTGGAAAGGATTGGCAAA
EST: TGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAG GTGTTTTAGAGAATCTTGGAATTGAACCAGAAGTGGAAAGGATTGGCAAAT
genomic: TGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAGgtaagctgat ... attctcttagGTGTTTTAGAGAATCTTGGAATTGAACCAGAAGTGGAAAGGATTGGCAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGAATATTATATTGCGTGTGCCTGTGAAGAAATATATGCCCCTCCAAGTGCATATTTTTCTTTGTTTGGATTGACTGTTCAAGCCCCATTTCTCAGAGgtaagctgattctgctttttcttgcatatttgtgggcaaaggttcaccttttagtgtatggtgcaccctataaagtaataaataaagttataaaacttat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgtggg