1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GGAGAAAAGCTCTTGGGAAGCCTTGGTGGCCTCTTCTCCAAAACTTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatcttctctgcatatgttttcttttataattttaatttttttgggttgtatcattggcataatctcatggcaaataacatctctgaaactatag...
species | Glycine max |
transcript | GLYMA17G08450.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGGEST: gi|213598509|gb|DB975940.1|DB975940
genomic: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGG
EST: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGGEST: gi|192323722|gb|FK016028.1|FK016028
genomic: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGG
EST: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAG-AGAAAGG-TAATCACTTGGAGCAAAGAGAGAAGTTGGEST: gi|14125679|gb|BG790117.1|BG790117
genomic: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGG
EST: ACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGGEST: gi|16345689|gb|BI971284.1|BI971284
genomic: ACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGG
EST: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGGEST: gi|16345688|gb|BI971283.1|BI971283
genomic: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGG
EST: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGGEST: gi|192330324|gb|FK019874.1|FK019874
genomic: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGG
EST: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAG ATGATCCAGTCAG
genomic: TTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatct ... tgatatgcagATGATCCAGTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGAAAAGCTCTTGGGAAGCCTTGGTGGCCTCTTCTCCAAAACTTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGgttaatatcttctctgcatatgttttcttttataattttaatttttttgggttgtatcattggcataatctcatggcaaataacatctctgaaactatag
- - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG