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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatatctaaattaatttttaggtgtctgggggctcttggcttagtcgctactaatattaattttttattatctttgtag

Basic information

species Glycine max
transcript GLYMA17G07060.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151412919|gb|EV282731.1|EV282731
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|213605874|gb|DB968626.1|DB968626
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|151395000|gb|EV264871.1|EV264871
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACTGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31464914|gb|CD406942.1|CD406942
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|209725386|gb|BW651543.1|BW651543
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|26059688|gb|CA802602.1|CA802602
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|9899832|gb|BE608800.1|BE608800
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|18040343|gb|BM308637.1|BM308637
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACTGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|193307254|gb|FK271094.1|FK271094
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACTGAGGAGTACATTGAGGGACAATTTACT
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACT
EST: gi|21602785|gb|BQ613116.1|BQ613116
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31308984|gb|CD394187.1|CD394187
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|213593117|gb|DB983405.1|DB983405
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|209724399|gb|BW658168.1|BW658168
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|9819380|gb|BE554893.1|BE554893
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|19269894|gb|BM886150.1|BM886150
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31560910|gb|CD486748.1|CD486748
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|5509823|gb|AI856381.1|AI856381
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31462481|gb|CD404509.1|CD404509
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACCATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|15287753|gb|BI471644.1|BI471644
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31466411|gb|CD408439.1|CD408439
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAT                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|214007236|gb|DB985828.1|DB985828
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|192327917|gb|FK022462.1|FK022462
EST:     GCTATCTCGTTTCCGTTGATTCCTGTATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|21256683|gb|BQ453571.1|BQ453571
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTATTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|15204194|gb|BI426962.1|BI426962
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31308447|gb|CD393650.1|CD393650
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|193595647|gb|FK552286.1|FK552286
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACTGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|14195915|gb|BE819926.2|BE819926
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|18039184|gb|BM307478.1|BM307478
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACTGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31305712|gb|CD390915.1|CD390915
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31463662|gb|CD405690.1|CD405690
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|214009878|gb|DB987526.1|DB987526
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|19053095|gb|BM731762.1|BM731762
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31305547|gb|CD390750.1|CD390750
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|254343494|gb|GR857250.1|GR857250
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|6071473|gb|AW100860.1|AW100860
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|209724400|gb|BW658169.1|BW658169
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31456379|gb|CD398407.1|CD398407
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACTATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|213603532|gb|DB970517.1|DB970517
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31457843|gb|CD399871.1|CD399871
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31561042|gb|CD486880.1|CD486880
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACT
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACT
EST: gi|8826564|gb|BE210294.1|BE210294
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
EST: gi|31459011|gb|CD401039.1|CD401039
EST:     GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAG                         CTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA
genomic: GCTATCTCGTTTCCGTTGATTCCTATATGAACTTGCAGgtatatatat ... atctttgtagCTGGCCAACACCGAGGAGTACATTGAGGGACAATTTACTGGAAATTTGGGA