1 5' 3' | 2 5' 3' | 3 5' 3' |
TCTTTACAGTGATTATCTCGATGCTGCTGATACACCTGGATGGTATTGTGGACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgctacggtgctagtattctgctccttaatgataataattataattatgaaaagaaattcttacaagtcaagcggctgtctgggctaaatatctttttcttttcccttttctgtgtag
species | Glycine max |
transcript | GLYMA17G00710.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAG ATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGTEST: gi|192293937|gb|FG986146.1|FG986146
genomic: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgcta ... ttctgtgtagATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
EST: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAG ATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGTEST: gi|192317016|gb|FK010919.1|FK010919
genomic: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgcta ... ttctgtgtagATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
EST: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAG ATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGTEST: gi|17020837|gb|BM091871.1|BM091871
genomic: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgcta ... ttctgtgtagATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
EST: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAG ATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGTEST: gi|254343214|gb|GR856918.1|GR856918
genomic: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgcta ... ttctgtgtagATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
EST: GACCCAATTTCTTCTCAACTGATGTTCTTCGAGACTTTGCAAAGACCCAG ATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATGTTGTAGGTEST: gi|26047244|gb|CA784103.1|CA784103
genomic: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgcta ... ttctgtgtagATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
EST: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAG ATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
genomic: GACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgcta ... ttctgtgtagATTGATTACATCCTTGGGAAGAACCCTCGGAAAATGAGCTATATTGTAGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTTTACAGTGATTATCTCGATGCTGCTGATACACCTGGATGGTATTGTGGACCCAATTTCTTCTCGACTGATGTCCTTCGAGACTTTGCAAAGACCCAGgtgggtgctacggtgctagtattctgctccttaatgataataattataattatgaaaagaaattcttacaagtcaagcggctgtctgggctaaatatctttttcttttcccttttctgtgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG