1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCATGGTTCTCTCAAAGGCTGCATTCTTTCACAGGAAATACTTGGATTTATATACTCACGAGATGTCTCCATCAATTCAGGACTATGTTTCCAGGGAGAGgtaatatatatggttaatcctctcaagaattttaaatttgttcttatcacttattctttcccatgtccttgatattgtttgaatttcaactttgttgccttcaacag
species | Glycine max |
transcript | GLYMA16G32650.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TATACTCACGAGATGTCTCCATCAATTCAGGACTATGGTTCCAGGGAGAG AACTTGTGAAGACATTGCAATGTCCCTTTTTGTTGCTAATGCCACAAGTGGEST: gi|15286710|gb|BI470601.1|BI470601
genomic: TATACTCACGAGATGTCTCCATCAATTCAGGACTATGTTTCCAGGGAGAGgtaatatata ... ccttcaacagAACTTGTGAAGACATTGCAATGTCCCTTTTTGTTGCTAATGCCACAAGTGG
EST: TATACTCACGAGATGTCTCCATCAATTCAGGACTATGTTTCCAGGGAGAG AACTTGTGAAGACATTGCAATGTCCCTTTTTGTTGCTAATGCCACAAGTGGEST: gi|208063792|gb|GD864648.1|GD864648
genomic: TATACTCACGAGATGTCTCCATCAATTCAGGACTATGTTTCCAGGGAGAGgtaatatata ... ccttcaacagAACTTGTGAAGACATTGCAATGTCCCTTTTTGTTGCTAATGCCACAAGTGG
EST: TCAGGACTATGTTTCCAGGGAGAG AACTTGTGAAGACATTGCAATGTCCCTTTTTGTTGCTAATGCCACAAGTGG
genomic: TCAGGACTATGTTTCCAGGGAGAGgtaatatata ... ccttcaacagAACTTGTGAAGACATTGCAATGTCCCTTTTTGTTGCTAATGCCACAAGTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATGGTTCTCTCAAAGGCTGCATTCTTTCACAGGAAATACTTGGATTTATATACTCACGAGATGTCTCCATCAATTCAGGACTATGTTTCCAGGGAGAGgtaatatatatggttaatcctctcaagaattttaaatttgttcttatcacttattctttcccatgtccttgatattgtttgaatttcaactttgttgccttcaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG