1 5' 3' | 2 5' 3' | 3 5' 3' |
TTTTTTTGTTCTTCTTTCTTTTGAATAATTGTAGGTCCCTGAAGATTATCAGCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAGgtacacatggttcttcttcataatattactccaagcattctccattttcaagggatcacttggatatgaatttaatttcccctttaattgcattctccattttcaacttgcag
species | Glycine max |
transcript | GLYMA16G32160.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAG AGATGTAGTTCCAATGCAAATTTTAGGGACATTGACGTGGAGAAAGCTCGGEST: gi|6666043|gb|AW277502.1|AW277502
genomic: GCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAGgtacacatgg ... caacttgcagAGATGTAGTTCCAATGCAAATTTTAGGGACATTGACGTGGAGAAAGCTCGG
EST: AGCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAG AGATGTAGATCCAATGCAAATTTTAGGGACATTGACGTGGAGAAAGCTCGG
genomic: AGCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAGgtacacatgg ... caacttgcagAGATGTAGTTCCAATGCAAATTTTAGGGACATTGACGTGGAGAAAGCTCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTTTTGTTCTTCTTTCTTTTGAATAATTGTAGGTCCCTGAAGATTATCAGCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAGgtacacatggttcttcttcataatattactccaagcattctccattttcaagggatcacttggatatgaatttaatttcccctttaattgcattctccattttcaacttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA