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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCATATGCTGTGAAAGAAAAATCCTCAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAAgtgagtttgaactttttctgtacctacttggagaaactagaatttagctaattaggttctgtttataggttctttatagtttgaactatgctttgagaga...

Basic information

species Glycine max
transcript GLYMA16G30130.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|42722729|gb|CK768628.1|CK768628
EST:     CAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAA                         GATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTT
genomic: CAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAAgtgagtttga ... attgtgttagGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTT
EST: gi|10233040|gb|BE801928.1|BE801928
EST:     CAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAA                         GATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTT
genomic: CAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAAgtgagtttga ... attgtgttagGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTT
EST: gi|46492746|gb|CN472302.1|CN472302
EST:     CAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAA                         GATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTT
genomic: CAGGGAACGGTGGCCTTTCAGAGGGGGTTGAAACTTCCTTGGATATGGAAgtgagtttga ... attgtgttagGATGATATTCTTGCAAGGATTGAAGAAAGACTTTCAGTTTGGGCTTTCCTT