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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGATTCGCCACCGCTACAGCCTGTCTCTGCAACGGTGGCTACTACTACTACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAGgtacgttggataattgataccttaattgggaaagcatgtgatttatttttttgtcgcctgtgatgtggttaaaaccagacaacaaattgaaagttttgtt...

Basic information

species Glycine max
transcript GLYMA16G25550.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|20207928|gb|BQ134009.1|BQ134009
EST:     TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAG                         AGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
genomic: TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAGgtacgttgga ... ggtgtttcagAGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
EST: gi|120533267|gb|EH261400.1|EH261400
EST:     TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAG                         AGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
genomic: TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAGgtacgttgga ... ggtgtttcagAGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
EST: gi|120534133|gb|EH262266.1|EH262266
EST:     TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAG                         AGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
genomic: TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAGgtacgttgga ... ggtgtttcagAGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
EST: gi|120533468|gb|EH261601.1|EH261601
EST:     TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAG                         AGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG
genomic: TACGCAGACAAATAGTGCTATGTCCTGTGGTTTGCAGACGCAGAACCTAGgtacgttgga ... ggtgtttcagAGTTGCCAGAAACCAATCCCCCGCAAGTCATTGAGGAGGAGCCACAAGGTG