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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCCATCATGGATAACCGAGGAAGAACTCATGGTCTTTGCAGACAAATTCCAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTgtaagtattttcattagtacttttctagtttaattttatttagaagacaattcaatttcttgcatggtacatgcacaattcaactttgaattctctacta...

Basic information

species Glycine max
transcript GLYMA16G24570.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192333317|gb|FK024294.1|FK024294
EST:     CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTT                         AAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC
genomic: CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTgtaagtattt ... atggatacagAAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC
EST: gi|254336912|gb|GR843091.1|GR843091
EST:     CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTT                         AAACTGGGAGCTTCTTGCACCATGGCAAGGATCAA-GCTAACAGTTCCAAC
genomic: CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTgtaagtattt ... atggatacagAAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC
EST: gi|254336913|gb|GR843092.1|GR843092
EST:     CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTT                         AAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC
genomic: CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTgtaagtattt ... atggatacagAAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC
EST: gi|51341471|gb|CO982788.1|CO982788
EST:     CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTT                         AAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC
genomic: CAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTgtaagtattt ... atggatacagAAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAAC