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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTGATATCCCTTTTCTTTTCTTCCCAGCTAAAGGAGAAGTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCAgtgagtctaaaaattttctattcaacccatgttgttatgtttacttgttagttactgttaggtttcagaattattcatgaatctgtttcctagagacttt...

Basic information

species Glycine max
transcript GLYMA16G24420.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15337740|gb|BI498396.1|BI498396
EST:     AGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCA                         TACTGACATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAG
genomic: AGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCAgtgagtctaa ... tattatgcagTACTGACATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAG
EST: gi|151396101|gb|EV265978.1|EV265978
EST:     AGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCA                         TACTGACATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAG
genomic: AGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCAgtgagtctaa ... tattatgcagTACTGACATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAG