1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GACCCTGAGCCTGATTACATGGGGCCTACTAGACTACGTCCTCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATGgtctaccctttacttgctttttatccttaattatatagaagcatgtttatattcttgataattttttttttttatag
species | Glycine max |
transcript | GLYMA16G24170.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCGATTGGATTATGCAGATCNNNNNATATTTNCTGGAACTCATCACCATG ATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGEST: gi|192321200|gb|FK014290.1|FK014290
genomic: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATGgtctaccctt ... ttttttatagATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTG
EST: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATG ATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGEST: gi|208117233|gb|GD918147.1|GD918147
genomic: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATGgtctaccctt ... ttttttatagATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTG
EST: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATG ATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTGEST: gi|192321199|gb|FK014289.1|FK014289
genomic: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATGgtctaccctt ... ttttttatagATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTG
EST: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATG ATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTG
genomic: TCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATGgtctaccctt ... ttttttatagATTCTTTTGGGGCTGGCAGCAGACAGTACCCGCCGGACTATTACGGTTCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACCCTGAGCCTGATTACATGGGGCCTACTAGACTACGTCCTCGATTGGATTATGCAGATCCACCTATATTTCCTGGAACTCATCACCATGgtctaccctttacttgctttttatccttaattatatagaagcatgtttatattcttgataattttttttttttatag
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