1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTGgtgaggctctctgcttcgggtgaaggtttttggagttgacgtgtttagtgcttgattggggatttgatttgcag
species | Glycine max |
transcript | GLYMA16G19540.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCGGTTGGAGCACAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTG GAATTTGGTAACGTTGAGACEST: gi|19270787|gb|BM887043.1|BM887043
genomic: TCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTGgtgaggctct ... tgatttgcagGAATTTGGTAACGTTGAGAC
EST: TCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTG GAATTTGGTAACGTTGAGACGCCTATGTATACTAGACTGCGACATTTTTTCEST: gi|213591717|gb|DB969817.1|DB969817
genomic: TCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTGgtgaggctct ... tgatttgcagGAATTTGGTAACGTTGAGACGCCTATGTATACTAGACTGCGACATTTTTTC
EST: TCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTG GAATTTGGTAACGTTGAGACGCCTATGTATACTAGACTGCGACATTTTTTC
genomic: TCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTGgtgaggctct ... tgatttgcagGAATTTGGTAACGTTGAGACGCCTATGTATACTAGACTGCGACATTTTTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGGTTCTGGCTATTGCAAATTCGGTTGGAGCAAAGGGGCCTCTCCTTCGGGGAGATTTGCTACTTTTTTGgtgaggctctctgcttcgggtgaaggtttttggagttgacgtgtttagtgcttgattggggatttgatttgcag
- - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT