1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTTCTTTTCTTCAAATATGGATGAGAACATGAAACAGTTCCAAAAGAAATTAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGgtaattcaaattgatggtgattaatgcttttacaaagacttggatacataataagtaaaaaattcattaaaaaagagtaaattctagcttctattgctac...
species | Glycine max |
transcript | GLYMA16G19450.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAG CTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCAEST: gi|192297436|gb|FG989500.1|FG989500
genomic: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGgtaattcaaa ... aaaagtacagCTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCA
EST: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAG CTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCAEST: gi|6482288|gb|AW201559.1|AW201559
genomic: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGgtaattcaaa ... aaaagtacagCTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCA
EST: TAACAGAACTGGAAGTGGAAGCTGAGCATCTTCTTTTAGCCCGACATCAG CTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCAEST: gi|57574212|gb|CX547187.1|CX547187
genomic: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGgtaattcaaa ... aaaagtacagCTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCA
EST: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAG CTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCAEST: gi|22931000|gb|BU548139.1|BU548139
genomic: TAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGgtaattcaaa ... aaaagtacagCTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCA
EST: AGCCCGACATCAG CTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCA
genomic: AGCCCGACATCAGgtaattcaaa ... aaaagtacagCTGGTTGAGAACGATAGATTGAGAAATGGGAATAGAGAAGCACTTACTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCTTTTCTTCAAATATGGATGAGAACATGAAACAGTTCCAAAAGAAATTAACAGAACTGGAAGTGGAAGCTGAGCATATTCTTTTAGCCCGACATCAGgtaattcaaattgatggtgattaatgcttttacaaagacttggatacataataagtaaaaaattcattaaaaaagagtaaattctagcttctattgctac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaga