1 5' 3' | 2 5' 3' | 3 5' 3' |
GGAATTAACTTCTTTGACAAGAAGAACAGCTTGCCTTTGCTCACTTCTGCCAGTAAAAGTATACAAGCATTCCGTAACCAAATATTCAGCTCTCATAAAGgtattgttttgttttggaaagtgaatattatctctccccttttacctaattttttcttgtatgaattgtttgctctcctttctcacctttttatcttgtc...
species | Glycine max |
transcript | GLYMA16G17640.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAGTAAAAGTATACAAGCATTCCGTAACCAAATATTCAGCTCTCATAAAG GGAAAGATTGATGACTTCCACCACTGTCAGTTTTGTGCTTACATTTTTTGAEST: gi|31473717|gb|CD415745.1|CD415745
genomic: CAGTAAAAGTATACAAGCATTCCGTAACCAAATATTCAGCTCTCATAAAGgtattgtttt ... tattttgcagGGAAAGATTGATGACTTCCACCACTGTCAGTTTTGTGCTTACATTTTTTGA
EST: CAGTAAAAGTATACAAGCATTCCGTAACCAAATATTCAGCTCTCATAAAG GGAAAGATTGATGACTTCCACCACTGTCAGTTTTGTGCTTACATATTTTTG
genomic: CAGTAAAAGTATACAAGCATTCCGTAACCAAATATTCAGCTCTCATAAAGgtattgtttt ... tattttgcagGGAAAGATTGATGACTTCCACCACTGTCAGTTTTGTGCTTACAT-TTTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAATTAACTTCTTTGACAAGAAGAACAGCTTGCCTTTGCTCACTTCTGCCAGTAAAAGTATACAAGCATTCCGTAACCAAATATTCAGCTCTCATAAAGgtattgttttgttttggaaagtgaatattatctctccccttttacctaattttttcttgtatgaattgtttgctctcctttctcacctttttatcttgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctctcct