1 5' 3' | 2 5' 3' | 3 5' 3' |
AAATGGAGACAGAATGGGTAGAACAAGACGAGCCTGGAGTTTACATTACAATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAGgtactatacattgcatcttcaagaacatgtttcttattgctttttcttctcagggaaatgattctatcttaggaacatgtattatgatgaaatatacaca...
species | Glycine max |
transcript | GLYMA16G17590.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAG CCGGGAAAGATTTGGGGAGGTGAATGCAAAAACTTGGTGGGAAGAGAACAGEST: gi|193421830|gb|FK387945.1|FK387945
genomic: ATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAGgtactataca ... atgtttgcagCCGGGAAAGATTTGGGGAGGTGAATGCAAAAACTTGGTGGGAAGAGAACAG
EST: ATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAG CCGGGAAAGATTTGGGGAGGTGAA
genomic: ATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAGgtactataca ... atgtttgcagCCGGGAAAGATTTGGGGAGGTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAATGGAGACAGAATGGGTAGAACAAGACGAGCCTGGAGTTTACATTACAATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAGgtactatacattgcatcttcaagaacatgtttcttattgctttttcttctcagggaaatgattctatcttaggaacatgtattatgatgaaatatacaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT