1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ATGATACCTGTTGCTGCAAATGATGTTGCTTTCTCGATCCATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatgatatgtatttctctagttgagaatgttgttcttttttgttctgtggactgaattctcgattttgctgaacttagtgattgttttgttgtag
species | Glycine max |
transcript | GLYMA16G07110.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGCTGTTCTACTGACAGTAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCAEST: gi|192313595|gb|FK005591.1|FK005591
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
EST: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTTCAEST: gi|298197220|gb|HO041963.1|HO041963
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
EST: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTTTTGCAEST: gi|151401800|gb|EV271613.1|EV271613
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
EST: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCAEST: gi|192306919|gb|FG999952.1|FG999952
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
EST: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCAEST: gi|7327013|gb|AW620811.1|AW620811
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
EST: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCAEST: gi|192313596|gb|FK005592.1|FK005592
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
EST: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAA CGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTTCA
genomic: ATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatga ... tttgttgtagCGTGGGAGTCAGAAAGTGTCCAAGGTTTCTATTGGAATTGTCTCTGTTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGATACCTGTTGCTGCAAATGATGTTGCTTTCTCGATCCATGCTGTTCTACTGACAGCAATTACATTGTTCCAGATTGCAATCTATGAAgtaagcatgatatgtatttctctagttgagaatgttgttcttttttgttctgtggactgaattctcgattttgctgaacttagtgattgttttgttgtag
- - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - GCTGTT