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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAACTGCAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGgtaactatgagcttcatttcttattatactttagctgttttaataattcggctttcaatgtttaagggattcattttttgatgttttag

Basic information

species Glycine max
transcript GLYMA16G04760.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151395710|gb|EV265587.1|EV265587
EST:     CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGTAAGCG                         GTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
genomic: CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGgtaactatga ... gatgttttagGTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
EST: gi|151400776|gb|EV270590.1|EV270590
EST:     CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCG                         GTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
genomic: CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGgtaactatga ... gatgttttagGTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
EST: gi|10845170|gb|BF068331.1|BF068331
EST:     CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCG                         GTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCC
genomic: CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGgtaactatga ... gatgttttagGTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATG-C
EST: gi|213590175|gb|DB963794.1|DB963794
EST:     CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCG                         GTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
genomic: CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGgtaactatga ... gatgttttagGTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
EST: gi|20448957|gb|BQ253081.1|BQ253081
EST:     CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCG                         GTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA
genomic: CAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGgtaactatga ... gatgttttagGTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCA