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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCCAGCAATCTAATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctcttgctctacccttatcattgtgcctttggtgtttgatgaaagtgttcagtgaatattagatgctatgttttatctgaggacggtgtttctat...

Basic information

species Glycine max
transcript GLYMA15G42300.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213588618|gb|DB957654.1|DB957654
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|151410306|gb|EV280121.1|EV280121
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|254317135|gb|GR826080.1|GR826080
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|19052548|gb|BM731215.1|BM731215
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCTTTTTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|213604537|gb|DB970657.1|DB970657
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|192324396|gb|FK015747.1|FK015747
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|213591664|gb|DB969764.1|DB969764
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
EST: gi|213619735|gb|DB967357.1|DB967357
EST:     ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACT                         GATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG
genomic: ATCTTGCGAATTCAGTTAGATGGCTCCAAACTCCGAGCTCCAGTAACACTgtattctctt ... tgttttgcagGATCTTTATTCTGAGTTGAAGGAACTAGTTCCAGAGTATCAG