1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagctttagtatataatcaaaattagctcttgattatttgtagtgtgttaataagtgtcattgctctaacttctcaatacaatgactttttgttcag
species | Glycine max |
transcript | GLYMA15G40590.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|213598025|gb|DB972213.1|DB972213
genomic: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|192300038|gb|FG992191.1|FG992191
genomic: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: GTAGATCAGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|193496721|gb|FK460305.1|FK460305
genomic: GTAGATCAGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|192300037|gb|FG992190.1|FG992190
genomic: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|151395293|gb|EV265164.1|EV265164
genomic: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|192310890|gb|FG998894.1|FG998894
genomic: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: TTGTAGATCAGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCCEST: gi|192310889|gb|FG998893.1|FG998893
genomic: TTGTAGATCAGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
EST: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTG GGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
genomic: AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagcttta ... ttttgttcagGGAGTCCTGAAAGGTTTTGATCAGGCAACAAATATAATTCTTGATGAGTCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGACAATTTCAGTCATTACAAATGATGGACGAAATATAGTGgtaagctttagtatataatcaaaattagctcttgattatttgtagtgtgttaataagtgtcattgctctaacttctcaatacaatgactttttgttcag
- - - - - - - - - - - GATGGA