1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACAGTTGTCGATACAACTGGTGCTGGTGATACTTTTACTGCTGCTTTTGCTGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTGgtgtgtatggtggaatgcaactcttttttctttctagaattttctctttggaaaaatgttcctaactacgttgttctgcaacag
species | Glycine max |
transcript | GLYMA15G38510.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTG CTGCTGCAGCTTGTCTTTGTGTTCAAGTGAAGGGAGCCTCTCCCAGCATGCEST: gi|57574195|gb|CX547170.1|CX547170
genomic: TGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTGgtgtgtatgg ... tctgcaacagCTGCTGCAGCTTGTCTTTGTGTTCAAGTGAAGGGAGCCTCTCCCAGCATGC
EST: TGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTG CTGCTGCAGCTTGTCTTTGTGTTCAAGTGAAGGGAGCCTCTCCCAGCATGCEST: gi|208160642|gb|GD958812.1|GD958812
genomic: TGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTGgtgtgtatgg ... tctgcaacagCTGCTGCAGCTTGTCTTTGTGTTCAAGTGAAGGGAGCCTCTCCCAGCATGC
EST: TGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTG CTGCTGCAGCTTGTCT
genomic: TGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTGgtgtgtatgg ... tctgcaacagCTGCTGCAGCTTGTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAGTTGTCGATACAACTGGTGCTGGTGATACTTTTACTGCTGCTTTTGCTGTGGCCTTGGTTGAGGGAAAGTCCAAAAAGGAATGCCTCAGATTTGCTGgtgtgtatggtggaatgcaactcttttttctttctagaattttctctttggaaaaatgttcctaactacgttgttctgcaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA