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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGGAAAGATAGCCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAGgtacattattttttgtggaaacatttcgcaaggggataaatgatttaccttttctccacatatatatatatatatatatatatatatatatatatatatatatatatatatgtattaatttagcgatgataatagtaataatatacataatttgttgtttttccaaacag

Basic information

species Glycine max
transcript GLYMA15G34620.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13477406|gb|BG507294.1|BG507294
EST:     CTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAG                         ATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGT
genomic: CTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAGgtacattatt ... ttccaaacagATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGT
EST: gi|151411830|gb|EV281641.1|EV281641
EST:     CTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAG                         ATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGT
genomic: CTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAGgtacattatt ... ttccaaacagATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGT
EST: gi|4291233|gb|AI441732.1|AI441732
EST:     CTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAG                         ATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGT
genomic: CTCCAATCACGTTGGATTCAGATATTGGCTACTTCGAGTTGGTTGTGAAGgtacattatt ... ttccaaacagATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGT