1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
TGTCCGAAGTATGCGAGCTTATGGAGTTCAGTTTAAAGAAGGGCCAGATGGTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGgtaagtagcttcatttaatattgttagttgctataagtgatgttactctacttactttctaccagagatataagtctttccaactgctagttgtggcaca...
species | Glycine max |
transcript | GLYMA15G16830.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTTTTGGAGTGTATGCTTCCAGAGATGTAGAGCCTCTTCGCCGAGCAAGG GTTATAATGGAAATTCCTCTGGAATTGATGTTAACCATTAAGCAAEST: gi|15286356|gb|BI470247.1|BI470247
genomic: GTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGgtaagtagct ... acttgggcagGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCAT-AAGCAA
EST: GTTTTGGAGTGTATGCTTCCAAA-ATGTAGAGCCTCTTCACCGAACAAGG GTTATAATGGAAATTCCTCTTTGA-TTGATGTTAACCATAAGCAAGAAGEST: gi|7691176|gb|AW759308.1|AW759308
genomic: GTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGgtaagtagct ... acttgggcagGTTATAATGGAAATTCCTCTT-GAATTGATGTTAACCATAAGCAAGAAG
EST: GTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGG GTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTCEST: gi|22539829|gb|BU089672.1|BU089672
genomic: GTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGgtaagtagct ... acttgggcagGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTC
EST: TTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTNC-CCGAGCAAGG GTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTCEST: gi|151409002|gb|EV278810.1|EV278810
genomic: TTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTT-CGCCGAGCAAGGgtaagtagct ... acttgggcagGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTC
EST: GTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGG GTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTC
genomic: GTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGgtaagtagct ... acttgggcagGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTCCGAAGTATGCGAGCTTATGGAGTTCAGTTTAAAGAAGGGCCAGATGGTTTTGGAGTGTATGCTTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGgtaagtagcttcatttaatattgttagttgctataagtgatgttactctacttactttctaccagagatataagtctttccaactgctagttgtggcaca
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG