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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGCTCAGCCATGTGACCGGTAACTACACCGCCTTGCAGATGCATCTTGTCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGgtagttataaattcaaaagtattaattactgcatagctagctagtttctttgaattgacctgggaaaataatttatcacaacgtaaatgaattacacggttattatattttatttacataaaccgtgggttggatttatgagatgttaatgataacgataataataataataataattttgaaattcag

Basic information

species Glycine max
transcript GLYMA15G11680.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19052667|gb|BM731334.1|BM731334
EST:     TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAG                         GTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
genomic: TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGgtagttataa ... tgaaattcagGTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
EST: gi|254334382|gb|GR844167.1|GR844167
EST:     TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAG                         GTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
genomic: TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGgtagttataa ... tgaaattcagGTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
EST: gi|254346516|gb|GR856238.1|GR856238
EST:     TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAG                         GTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
genomic: TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGgtagttataa ... tgaaattcagGTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
EST: gi|17400985|gb|BM177767.1|BM177767
EST:     TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAG                         GTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
genomic: TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGgtagttataa ... tgaaattcagGTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
EST: gi|254327037|gb|GR836646.1|GR836646
EST:     TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAG                         GTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG
genomic: TCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGgtagttataa ... tgaaattcagGTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAG