Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGGATTTTCACGTAGCCATGGCGCCTCAGAGAGCCAAGCCCTTCTATGCCTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatgttttctatctttcaactttcatttctctttctctataataaatacagtaaattcattatcataaaaataaatacagtaaattaaactgag...

Basic information

species Glycine max
transcript GLYMA15G08610.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|4292154|gb|AI441864.1|AI441864
EST:     CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG                         G
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcag-
EST: gi|4292154|gb|AI441864.1|AI441864
EST:     CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG                         G
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcag-
EST: gi|58020386|gb|CX707128.1|CX707128
EST:     CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG                         ACGGTGTATTTGGAGCAATGATGAAG
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAG
EST: gi|7326886|gb|AW620684.1|AW620684
EST:     CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG                         ACGGTGTATTTGGAGCAATGATGAAGGTAAA
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAGGTAAA
EST: gi|7326731|gb|AW620529.1|AW620529
EST:     CTCTTTAGTTGACAGGTGTAGGAACGCCTATAACTCTGATGCAATCAAAG                         ACAGTGTATTTGGAGCAATGATGAAGGTAAA
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAGGTAAA
EST: gi|31458281|gb|CD400309.1|CD400309
EST:     CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG                         ACGGTGTATTTGGAGCAATGATGAAG
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAG
EST: gi|298180580|gb|HO025667.1|HO025667
EST:     CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG                         ACGGTGTATTTGGAGCAATGATGAAG
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAG