1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCGGATTTTCACGTAGCCATGGCGCCTCAGAGAGCCAAGCCCTTCTATGCCTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatgttttctatctttcaactttcatttctctttctctataataaatacagtaaattcattatcataaaaataaatacagtaaattaaactgag...
species | Glycine max |
transcript | GLYMA15G08610.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG ACGGTGTATTTGGAGCAATGATGAAGEST: gi|4292154|gb|AI441864.1|AI441864
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAG
EST: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG GEST: gi|4292154|gb|AI441864.1|AI441864
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcag-
EST: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG GEST: gi|7326886|gb|AW620684.1|AW620684
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcag-
EST: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG ACGGTGTATTTGGAGCAATGATGAAGGTAAAEST: gi|7326731|gb|AW620529.1|AW620529
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAGGTAAA
EST: CTCTTTAGTTGACAGGTGTAGGAACGCCTATAACTCTGATGCAATCAAAG ACAGTGTATTTGGAGCAATGATGAAGGTAAAEST: gi|58020386|gb|CX707128.1|CX707128
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAGGTAAA
EST: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG ACGGTGTATTTGGAGCAATGATGAAGEST: gi|298180580|gb|HO025667.1|HO025667
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAG
EST: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGG ACGGTGTATTTGGAGCAATGATGAAG
genomic: CTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatg ... tcttatgcagACGGTGTATTTGGAGCAATGATGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGGATTTTCACGTAGCCATGGCGCCTCAGAGAGCCAAGCCCTTCTATGCCTCTTTAGTTGACAGGTTTAGGAACGCCTATAACTCTGATGCAATCAAGGgtatgttatgttttctatctttcaactttcatttctctttctctataataaatacagtaaattcattatcataaaaataaatacagtaaattaaactgag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaattaaa