1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAGgtgggactctctgattttattgatttaattttctctcaacttgttttcagtatcgccatgttttaatatttctctttgtttgtatttggatggttacaacag
species | Glycine max |
transcript | GLYMA15G00840.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAG AGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCTGCTGAAEST: gi|298167794|gb|HO013057.1|HO013057
genomic: TTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAGgtgggactct ... gttacaacagAGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCTGCTGAA
EST: TTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAG AGGGTGCAACCCTTTGEST: gi|209700591|gb|BW670322.1|BW670322
genomic: TTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAGgtgggactct ... gttacaacagAGGGTGCAACCCTTTG
EST: TTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAG AGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCTGCTGAA
genomic: TTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAGgtgggactct ... gttacaacagAGGGTGCAACCCTTTGATAAAAGGTATCAGTACCTCTTGTTTGCTGCTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGAATATCCGGAGATTGAAGACCTCATGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAGgtgggactctctgattttattgatttaattttctctcaacttgttttcagtatcgccatgttttaatatttctctttgtttgtatttggatggttacaacag
- - - - - - - - TTGAAG
- - - - - - - - TGAAGA
- - - - - - - - - - - - - - TGAAGC