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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGCTTGCCTTCTACACAGGACCCACAGgtatccctcttttatttccctttttctcttaaggcccgtatcctcttttcaactcactcgtgttgctttctgcag

Basic information

species Glycine max
transcript GLYMA15G00380.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213610489|gb|DB958794.1|DB958794
EST:     GCAGCTTGCCTTCTACACAGGACCCACAG                         TTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGANATGATTATAT
genomic: GCAGCTTGCCTTCTACACAGGACCCACAGgtatccctct ... ctttctgcagTTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGAAATGATTATAT
EST: gi|213614610|gb|DB972850.1|DB972850
EST:     GCAGCTTGCCTTCTACACAGGACCCACAG                         TTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAAC
genomic: GCAGCTTGCCTTCTACACAGGACCCACAGgtatccctct ... ctttctgcagTTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAAC
EST: gi|209711678|gb|BW674041.1|BW674041
EST:     GCAGCTTGCCTTCTACACAGGACCCACAG                         TTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGAAATGATTATAT
genomic: GCAGCTTGCCTTCTACACAGGACCCACAGgtatccctct ... ctttctgcagTTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGAAATGATTATAT
EST: gi|209715667|gb|BW674353.1|BW674353
EST:     GCAGCTTGCCTTCTACACAGGACCCACAG                         TTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGAAATGATTATAT
genomic: GCAGCTTGCCTTCTACACAGGACCCACAGgtatccctct ... ctttctgcagTTGGGGGTCTGCTTAATGCCACCTTTGGCAATGCAACTGAAATGATTATAT