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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGATCCCAACCTTGGTTCCAAGAAAACTTGCACAGTGGATGCATCTCTACAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTGgtcagtcatttatcttttgctccatttgttttgctttccaatcaccctttacaggaaatctagttttgcag

Basic information

species Glycine max
transcript GLYMA14G39890.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208092303|gb|GD889368.1|GD889368
EST:     CAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTG                         GAATAGTAAATCAAATAT
genomic: CAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTGgtcagtcatt ... agttttgcagGAAT-GTAAATCAAATAT
EST: gi|18734111|gb|BM527991.1|BM527991
EST:     CAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTG                         GAATGTAAATCAAATATGGGCCCTTTCCGCATTCGTTTAACATATACTCAC
genomic: CAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTGgtcagtcatt ... agttttgcagGAATGTAAATCAAATATGGGCCCTTTCCGCATTCGTTTAACATATACTCAC
EST: gi|209721755|gb|BW682596.1|BW682596
EST:     CAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTG                         GAATGTAAATCAAATATGGGCCCTTTCCGCATTCGTTTAACATATACTCAC
genomic: CAAAGGACGCCTTAAAATTTTCTCTTATCTATCCTCTTCAAAATCTTCTGgtcagtcatt ... agttttgcagGAATGTAAATCAAATATGGGCCCTTTCCGCATTCGTTTAACATATACTCAC