1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGAATTAGCCACAGAACTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCAgtatgtgattaactacttcctctatagttatttttgattcaattaaatttatttatttaataagttcaagaaaaaaggaatctttatacttcagataaagctgttcttgaacatttttttttgtcattatcttag
species | Glycine max |
transcript | GLYMA14G37350.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCA TTAACCGAGAAGATTTACAAGAATCTAGACAACATGACAAGACTTGTTAGAEST: gi|213603629|gb|DB966785.1|DB966785
genomic: CTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCAgtatgtgatt ... attatcttagTTAACCGAGAAGATTTACAAGAATCTAGACAACATGACAAGACTTGTTAGA
EST: CTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCA TTAACCGAGAAGATTTACAAGAATCTAGACNACATGACAAGACTTGTTAGAEST: gi|17519247|gb|BM188289.1|BM188289
genomic: CTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCAgtatgtgatt ... attatcttagTTAACCGAGAAGATTTACAAGAATCTAGACAACATGACAAGACTTGTTAGA
EST: CTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCA TTAACCGAGAAGATTTACAAGAATCTAGACAACATGACAAGACTTGTTAGA
genomic: CTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCAgtatgtgatt ... attatcttagTTAACCGAGAAGATTTACAAGAATCTAGACAACATGACAAGACTTGTTAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAATTAGCCACAGAACTCACCATCAAAATCATGGACACATTGAGAAGGATGAATCCTGGGTTCCAgtatgtgattaactacttcctctatagttatttttgattcaattaaatttatttatttaataagttcaagaaaaaaggaatctttatacttcagataaagctgttcttgaacatttttttttgtcattatcttag
- - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - AGGATG