1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCTGGACTCTTTGTTTATGACATTTTCTGGGTTTTCTTCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAGgttaacattttaatgaaataattttatttttcctatcttcgtgtgaagtttaaatgtttaatactcccttgattgcgaaactgtagactttcttgtttaa...
species | Glycine max |
transcript | GLYMA14G21190.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAG CTTTTGTTCCCCACCGCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTTEST: gi|192297521|gb|FG992719.1|FG992719
genomic: TCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAGgttaacattt ... tgtttggcagCTTTTGTTCCCCACCGCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTT
EST: GCGTTGCAAAATCATTTGATGCTCCAATAAAG CTTTTGTTCCCCACCGCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTTEST: gi|208136700|gb|GD939674.1|GD939674
genomic: GCGTTGCAAAATCATTTGATGCTCCAATAAAGgttaacattt ... tgtttggcagCTTTTGTTCCCCACCGCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTT
EST: TCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAG CTTTTGTTCCCCACCGCAGATTCTGCAAGGCCEST: gi|192301904|gb|FG995522.1|FG995522
genomic: TCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAGgttaacattt ... tgtttggcagCTTTTGTTCCCCACCGCAGATTCTGCAAGGCC
EST: TCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAG CTTTTGTTCCCCACCGCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTT
genomic: TCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAGgttaacattt ... tgtttggcagCTTTTGTTCCCCACCGCAGATTCTGCAAGGCCATTTTCAATGCTTGGACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGGACTCTTTGTTTATGACATTTTCTGGGTTTTCTTCACTCCAGTGATGGTCAGCGTTGCAAAATCATTTGATGCTCCAATAAAGgttaacattttaatgaaataattttatttttcctatcttcgtgtgaagtttaaatgtttaatactcccttgattgcgaaactgtagactttcttgtttaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctt