1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGAATCCTCTCAAGCTTCAGAAGCAAATGAAACCACTCAAGATGATGCCACAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGgtatttattcaaaatattccatgtgcttttgattaccatcgctcattacagttacaattttacgctcttaaatatcataatggctttgaatttcttggtc...
species | Glycine max |
transcript | GLYMA14G12380.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTG ATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGEST: gi|31465459|gb|CD407487.1|CD407487
genomic: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGgtatttattc ... tttgggttagATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
EST: GTTGCGCCCTTG ATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGEST: gi|192320474|gb|FK012332.1|FK012332
genomic: GTTGTGCCCTTGgtatttattc ... tttgggttagATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
EST: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTG ATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGEST: gi|58018057|gb|CX704799.1|CX704799
genomic: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGgtatttattc ... tttgggttagATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
EST: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTG ATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGEST: gi|31466528|gb|CD408556.1|CD408556
genomic: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGgtatttattc ... tttgggttagATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
EST: GTTGCGCCCTTG ATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAGEST: gi|192320475|gb|FK012333.1|FK012333
genomic: GTTGTGCCCTTGgtatttattc ... tttgggttagATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
EST: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCC-TTG ATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
genomic: CAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGgtatttattc ... tttgggttagATGGTGGATGTAGGTCCTGTAGCTCCAAGAGCCCCTCCTGCCAGTAAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAATCCTCTCAAGCTTCAGAAGCAAATGAAACCACTCAAGATGATGCCACAAATATGCTTGAAGATCTTCTAAATAGATTGGAAGAAGTTGTGCCCTTGgtatttattcaaaatattccatgtgcttttgattaccatcgctcattacagttacaattttacgctcttaaatatcataatggctttgaatttcttggtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT