Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTTTATCAGCAGGAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAGgtcaatgttccattctcttaaaaatattattcagcagacttctccagtgaaatgaaaaaactcaatgtgattttttgcattccag

Basic information

species Glycine max
transcript GLYMA14G03100.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208229571|gb|GE020868.1|GE020868
EST:     GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAG                         GCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
genomic: GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAGgtcaatgttc ... tgcattccagGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
EST: gi|207806015|gb|GD779192.1|GD779192
EST:     GAATCTAAACAG                         GCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
genomic: GAATCTAAACAGgtcaatgttc ... tgcattccagGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
EST: gi|208178707|gb|GD977876.1|GD977876
EST:     GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAG                         GCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
genomic: GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAGgtcaatgttc ... tgcattccagGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
EST: gi|208272616|gb|GE067942.1|GE067942
EST:     GAAGCGTCCAAATTAAAACGACAAATCAGGGACATTCAGAATCTAAACAG                         GCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
genomic: GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAGgtcaatgttc ... tgcattccagGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
EST: gi|208309977|gb|GE109747.1|GE109747
EST:     GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCCGAATCTAAACAG                         GCACATCCTTGGTGAAGCTCTTAGCT
genomic: GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAGgtcaatgttc ... tgcattccagGCACATCCTTGGTGAAGCTCTTAGCT
EST: gi|193521334|gb|FK480375.1|FK480375
EST:     GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAG                         GCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA
genomic: GAAGCGTCCAAATTAAAACGACAAATCAGAGACATTCAGAATCTAAACAGgtcaatgttc ... tgcattccagGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGTCTGAAGGAATTAAAGAA