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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAATAGTTTCAATATTCCCTGTTATTTCACCTCCAAACCTTACTCCAGCACAATCAACTCGAGTGTGCAATGCTCTTGCTCTTTTTCAGgtgagaattgatatgaccttgtcctatcaagttttatatcatgtacgtgttcaacatatagacactttcaatttgtcccaaatattattttaactctgaa...

Basic information

species Glycine max
transcript GLYMA14G02480.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G02480.1 (Glycine max), 5'ss of exon 3
lower sequence: Vv19s0090g00930.t01 (Vitis vinifera), 5'ss of exon 5
GAAATAGTTTCAATATTCCCTGTTATTTCACCTCCAAACCTTACTCCAGCACAATCAACTCGAGTGTGCAATGCTCTTGCTCTTTTTCAGgtgagaattgatatgaccttgtcctatcaagttttatatcatgtacgtgttcaacatat----agacactttcaatttgtcccaaatattattttaactctgaa
|| ||||||||||| |  |||||| | ||||| ||||| || |||||||||||||||| ||| || |||||||| ||||| ||| | ||||| | |    || |   ||| |    |    | ||||| ||| |  ||    || | ||    | ||| |||   | |||  ||  | | ||| |||       
GAGATAGTTTCAATTTATCCTGTTCTATCACCACCAAATCTAACTCCAGCACAATCAAATCGGGTCTGCAATGCACTTGCCCTTCTCCAGgtcaaat---attttttcttattaagttccctgttatagcatttttgtcaaaaaaaaatttccatacattttatttatgttgcacttgtcattgtaaagtcag-