1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AGGGAGTGCTGGAAGCACTGCCATTAGCATTGCCACTGTTGCTCCTGCCTACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAGgtattttataatggttttaatgtaatcatgtaaattctgttatgaaatctagccataaacctctaagattttgtgtacaattgatgattggcttgcgtgaatcaaccttcag
species | Glycine max |
transcript | GLYMA14G01780.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAG TCTCAAATACTTGAAGCCEST: gi|207773878|gb|GD745800.1|GD745800
genomic: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAGgtattttata ... caaccttcagTCTCAAATACTTGAAGCC
EST: CGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAAGAAG TCTCAAATACTTGAAGCCEST: gi|207731112|gb|GD706571.1|GD706571
genomic: CGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGA-GAAGgtattttata ... caaccttcagTCTCAAATACTTGAAGCC
EST: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAG TCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGAGACCGGTGEST: gi|208112042|gb|GD911104.1|GD911104
genomic: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAGgtattttata ... caaccttcagTCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGAGACCGGTG
EST: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAG TCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGEST: gi|193412188|gb|FK378133.1|FK378133
genomic: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAGgtattttata ... caaccttcagTCTCAAATACTTGAAGCCCTTGGGGCAACTGTTG
EST: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAG TCTCAAATACTTGAAGCCCTTGGG-CAACTGTTGAAAGAGTGAGACCGGTG
genomic: ACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAGgtattttata ... caaccttcagTCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGAGACCGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGGAGTGCTGGAAGCACTGCCATTAGCATTGCCACTGTTGCTCCTGCCTACGGGTGCAGGACCCATGTGGTTATACCAGATGATGCTGCCATTGAGAAGgtattttataatggttttaatgtaatcatgtaaattctgttatgaaatctagccataaacctctaagattttgtgtacaattgatgattggcttgcgtgaatcaaccttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC