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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgcgatttaacgttgtaattcgtgctattgatgtttttaggtgatgacatctacaatttcactatgtagattggtatattgttgtcagttttt...

Basic information

species Glycine max
transcript GLYMA13G41110.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207836538|gb|GD805751.1|GD805751
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGATGTGCAAAGAAGGTGTATATTGGG
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTGCAAAGAAGGTGTATATTGGG
EST: gi|208084810|gb|GD881064.1|GD881064
EST:     GGAATATCTCAAGTCATGATTTCGAGAAAAACG                         TTGAAGAAGATGTGCAAAGAAGGTGTATATTGGG
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAA-CGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTGCAAAGAAGGTGTATATTGGG
EST: gi|208149896|gb|GD944218.1|GD944218
EST:     GGAATATCTCAAGTCATGATTTCGAAGAAAACG                         TTGAAGAAGATGTG
genomic: GGAATATCTCAAGTCATGATTTCGA-GAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTG
EST: gi|208257813|gb|GE055352.1|GE055352
EST:     GGAATACCTCAAGTCATGATTTCGAGAAAACG                         TTGAAGAAGATGTGCAAAGAAGG
genomic: GGAATATCTCAAGTCATGATTTCGAGAAAACGgtaagttcgc ... gttgttgcagTTGAAGAAGATGTGCAAAGAAGG