1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTCGTGGGGTGTGTTGAAGGAGCATTGGGTATACGTGAGTGGCTGGAATCACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatattgcttacttaattcaagtttgagtaaactattattttggtctccaaaagtgtacaatgcaacaagttcttgaaactaggaaaatttcatt...
species | Glycine max |
transcript | GLYMA13G23790.3 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|5688024|gb|AI941039.1|AI941039
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|10233461|gb|BE802349.1|BE802349
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|27426313|gb|CA937833.1|CA937833
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|17401013|gb|BM177795.1|BM177795
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|17400846|gb|BM177628.1|BM177628
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|11688957|gb|BF596695.1|BF596695
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|254322348|gb|GR837762.1|GR837762
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|213589062|gb|DB973162.1|DB973162
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|7233269|gb|AW568617.1|AW568617
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|17023857|gb|BM094891.1|BM094891
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|17023301|gb|BM094335.1|BM094335
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTCEST: gi|6916468|gb|AW397998.1|AW397998
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
EST: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTG AACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
genomic: ACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatat ... tctgctgcagAACTTGAGAAACACATTCCAGATGCCCATGTCATCATATCTACTCCATTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCGTGGGGTGTGTTGAAGGAGCATTGGGTATACGTGAGTGGCTGGAATCACAGGGTCATCAGTACATTGTCACTGATGACAAAGAAGGACCAGATTCTGgttagtatattgcttacttaattcaagtttgagtaaactattattttggtctccaaaagtgtacaatgcaacaagttcttgaaactaggaaaatttcatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG