1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GAGGGATTCAAAGCTGCGGGAATGTACGGAGGTTTACGTGCCAAAGGAGAAAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacgttttgctgattttgtgtttggtttgcacttcacgtgattgagttgaatttctttcag
species | Glycine max |
transcript | GLYMA13G19450.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAG GATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAAEST: gi|120530228|gb|EH258362.1|EH258362
genomic: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacg ... tttctttcagGATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
EST: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAG GATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAAEST: gi|192294186|gb|FG986275.1|FG986275
genomic: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacg ... tttctttcagGATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
EST: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAG GATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAAEST: gi|213601471|gb|DB956735.1|DB956735
genomic: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacg ... tttctttcagGATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
EST: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAG GATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAAEST: gi|209725373|gb|BW658260.1|BW658260
genomic: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacg ... tttctttcagGATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
EST: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAG GATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAAEST: gi|209727793|gb|BW658717.1|BW658717
genomic: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacg ... tttctttcagGATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
EST: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAG GATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
genomic: AAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacg ... tttctttcagGATCGTTTACAACAAATGTGGTTGCGGCTGCACCGGTGTTATACTGCAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGGATTCAAAGCTGCGGGAATGTACGGAGGTTTACGTGCCAAAGGAGAAAAGCCTGATCTCGCGCTTGTCACGTGCGATGTTGATGCAGTATCTGCAGgttcgttacgttttgctgattttgtgtttggtttgcacttcacgtgattgagttgaatttctttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG