1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TAAAGTAGTCCCTGTTCCTTCGTCAATTGACCCAGCTGTTGCAGCATCCATCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtactatgatgttacaatcattttagctgaagccatttgcctttttcttttacttctgttagcatactagactagactgattagcatatgtagca...
species | Glycine max |
transcript | GLYMA12G36990.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGEST: gi|298177857|gb|HO027410.1|HO027410
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAG
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|151395021|gb|EV264892.1|EV264892
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|213590530|gb|DB973303.1|DB973303
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|192299645|gb|FG987748.1|FG987748
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|254331742|gb|GR843592.1|GR843592
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: ATTCTCAAGGGCATTGACAACTCAGTTTTTGCTTCGGCGCTTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGEST: gi|298191369|gb|HO038848.1|HO038848
genomic: ATTCTCAAGGGCAT-GACAACTCAGTTTTTGCTTCGGCGCT-GTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGG
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCTAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|192312797|gb|FK003995.1|FK003995
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|192306490|gb|FG996194.1|FG996194
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|192312798|gb|FK003996.1|FK003996
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|298175464|gb|HO015097.1|HO015097
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGAEST: gi|58019861|gb|CX706603.1|CX706603
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
EST: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGCCGCTGTTTCCAG GTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
genomic: TCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtact ... cattttacagGTTGAACCCGGTCATACAATTCTTGTCCATGCAGCAGCTGGCGGAGTTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAAAGTAGTCCCTGTTCCTTCGTCAATTGACCCAGCTGTTGCAGCATCCATCATTCTCAAGGGCATGACAACTCAGTTTTTGCTTCGGCGCTGTTTCCAGgcaatgtactatgatgttacaatcattttagctgaagccatttgcctttttcttttacttctgttagcatactagactagactgattagcatatgtagca
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