1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
CTGGAGATGGCGTTAATTTGAAGAAATGGTTGCTGTTGGGAGCGGCAAATAAATATTGGGGACCGTCTAGATCAATTCATGGCTCGGgtataaattataaaatacaacatcacatacatggcttgatttttactattcatggaatcaggagcttgaagttcattacctttcattcaatactctctttgtttccatattcatacttgtttgttgtcgcttgcatgtggatgacttatttgtttttcccctaactctattacag
species | Glycine max |
transcript | GLYMA12G36820.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGGAGCGGCAAATAAATATTGGGGACCGTCTAGATCAATTCATGGCTCGG CATCATTGGCAAGAGACTATTATGATATTCTTGGTGTGAGTAAGAATGCTAEST: gi|193593319|gb|FK548931.1|FK548931
genomic: GGGAGCGGCAAATAAATATTGGGGACCGTCTAGATCAATTCATGGCTCGGgtataaatta ... tctattacagCATCATTGGCAAGAGACTATTATGATATTCTTGGTGTGAGTAAGAATGCTA
EST: GGGGACCGTCTAGATCAATTCATGGCTCGG CATCATTGGCAAGAGACTATTATGATATTCTTGGTGTGAGTAAGAATGCTAEST: gi|27446060|gb|CA953183.1|CA953183
genomic: GGGGACCGTCTAGATCAATTCATGGCTCGGgtataaatta ... tctattacagCATCATTGGCAAGAGACTATTATGATATTCTTGGTGTGAGTAAGAATGCTA
EST: GGGAGCGGCAAATAAATATTGGGGACCGTCTAGATCAATTCATGGCTCGG CATCATTGGCAAGAGACTATTATGATATTCTTGGTGTGAGTAAGAATGCTA
genomic: GGGAGCGGCAAATAAATATTGGGGACCGTCTAGATCAATTCATGGCTCGGgtataaatta ... tctattacagCATCATTGGCAAGAGACTATTATGATATTCTTGGTGTGAGTAAGAATGCTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGGAGATGGCGTTAATTTGAAGAAATGGTTGCTGTTGGGAGCGGCAAATAAATATTGGGGACCGTCTAGATCAATTCATGGCTCGGgtataaattataaaatacaacatcacatacatggcttgatttttactattcatggaatcaggagcttgaagttcattacctttcattcaatactctctttgtttccatattcatacttgtttgttgtcgcttgcatgtggatgacttatttgtttttcccctaactctattacag
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