1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAATTTTGGTTTGTGACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTGgcaagtttatattctctcaaaactacaatgtttggttgctttacacttactttttgtaaacccaatactattgacattgaggtttaagaatgccaaatttaatttttagatgattgggctttctttgcag
species | Glycine max |
transcript | GLYMA12G34960.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTG GTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTGTTCACTGTGAATEST: gi|18040173|gb|BM308467.1|BM308467
genomic: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTGgcaagtttat ... ttctttgcagGTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTGTTCACTATGAAT
EST: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTG GTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTGTTCACTATGAATEST: gi|16997191|gb|BM086563.1|BM086563
genomic: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTGgcaagtttat ... ttctttgcagGTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTGTTCACTATGAAT
EST: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTG GTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTGTTCACTATGAATEST: gi|18735287|gb|BM528677.1|BM528677
genomic: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTGgcaagtttat ... ttctttgcagGTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTGTTCACTATGAAT
EST: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTG GTGATCTGGGTCAAACTTNTGATTCAAA-AAGAACCTTG
genomic: GACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTGgcaagtttat ... ttctttgcagGTGATCTGGGTCAAACTTTTGATTCAAACAAGACCCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTATTATGAAGTTGGAATTGGGCATACTACTAGGCAATTTTGGTTTGTGACTCCTCCTGAAGTTCACCCTGATGCGCCTTATACATTTGGTCTCATTGgcaagtttatattctctcaaaactacaatgtttggttgctttacacttactttttgtaaacccaatactattgacattgaggtttaagaatgccaaatttaatttttagatgattgggctttctttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG