1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TAAACATCCACCATACTTGCCGTCACCGCCGGTATGGCCGCCACAAACAGCTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGGgttaactcttttgacttttgaacattctcacttctctttcttttactatattcaaaactcatttaattataattgactattgagttggtggaataaaagt...
species | Glycine max |
transcript | GLYMA12G33430.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCCGTCTCCACCGGCACCGGACCCTCTATATTGGCACCAACACCAACGG GCTCCAAACGCGCCAACCCGAGGAACACCGTGTTTTCCACAACCTCTGACAEST: gi|51334858|gb|CO978724.1|CO978724
genomic: CTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGGgttaactctt ... tttgatacagGCTCCAAACGCGCCAACCCGAGGAACACCGTGTTTTCCACAACCTCTGACA
EST: CTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGG GCTCCAAACGCGCCAACCCGAGGAACACCGTGTTTTCCACAACCTCTGACAEST: gi|22522235|gb|BU081038.1|BU081038
genomic: CTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGGgttaactctt ... tttgatacagGCTCCAAACGCGCCAACCCGAGGAACACCGTGTTTTCCACAACCTCTGACA
EST: CTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGG GCTCCAAACGCGCCAACCCGAGGAACACCGTGTTTTCCACAACCTCTGACA
genomic: CTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGGgttaactctt ... tttgatacagGCTCCAAACGCGCCAACCCGAGGAACACCGTGTTTTCCACAACCTCTGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAAACATCCACCATACTTGCCGTCACCGCCGGTATGGCCGCCACAAACAGCTCCGTCTCCACCGGCACCCGACCCTCTATATTGGCACCAACACCAACGGgttaactcttttgacttttgaacattctcacttctctttcttttactatattcaaaactcatttaattataattgactattgagttggtggaataaaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttggtgg