1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AGACCAACCCACTGGGACGGGTTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctatttgataactgataaaataaaagtatttcataataaaatcaaactcattcatttatgtatgttatataattactcatattgagtggttaaa...
species | Glycine max |
transcript | GLYMA12G30160.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAG GCATTTTTCAAEST: gi|213599305|gb|DB962314.1|DB962314
genomic: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctat ... ataatgacagGCATTTTTCAA
EST: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAG GCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTAEST: gi|151408213|gb|EV278021.1|EV278021
genomic: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctat ... ataatgacagGCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTA
EST: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAG GCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACTEST: gi|209701627|gb|BW667368.1|BW667368
genomic: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctat ... ataatgacagGCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACT
EST: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAG GCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACTEST: gi|213591021|gb|DB973776.1|DB973776
genomic: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctat ... ataatgacagGCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACT
EST: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAG GCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACT
genomic: TTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctat ... ataatgacagGCATTTTTCAAGGAGCACCCTCAGCTCACTAAGAATGACTTTTATATTACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGACCAACCCACTGGGACGGGTTTCAGCTATACTTCTGATGAGAGTGACATTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTGCAGgtaattctatttgataactgataaaataaaagtatttcataataaaatcaaactcattcatttatgtatgttatataattactcatattgagtggttaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG