1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGAGGGAGGGGCTACATGGGCATATGAGGTTGGTGCACAATCAATGGTTTGTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtgatgcttcataattttttaaaatacatttattcctcaaatggatttgtgttggctctaacctgttgtgtttgctcggttattcttgcag
species | Glycine max |
transcript | GLYMA12G09990.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAG ATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAEST: gi|207709500|gb|GD690072.1|GD690072
genomic: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtg ... attcttgcagATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
EST: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAG ATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAEST: gi|298190070|gb|HO032191.1|HO032191
genomic: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtg ... attcttgcagATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
EST: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAG ATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAEST: gi|207760262|gb|GD732689.1|GD732689
genomic: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtg ... attcttgcagATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
EST: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAG ATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAEST: gi|21677028|gb|BQ629379.1|BQ629379
genomic: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtg ... attcttgcagATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
EST: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAG ATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAEST: gi|4436966|gb|AI522831.1|AI522831
genomic: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtg ... attcttgcagATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
EST: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAG ATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
genomic: GTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtg ... attcttgcagATGCTTTGTGAGGAATGCGGTTTCTTTCTGGAAATAGCTGACTTAATCAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAGGGAGGGGCTACATGGGCATATGAGGTTGGTGCACAATCAATGGTTTGTCCAATCATTGTTGAGGATCTCAATCCTCCTCGTCAGATGCTAGTAGAGgtaataagtgatgcttcataattttttaaaatacatttattcctcaaatggatttgtgttggctctaacctgttgtgtttgctcggttattcttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG