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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAGACTGACAATGATGCTGGTTTTTTGAAACTTACAAGAACCCAAGAGTGGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAGgtatgctttagagtagttttcattttacatcccaactttcagtttcttatgtatgttattatcttgtcagggaaattggatatgaaatatgaaattcatg...

Basic information

species Glycine max
transcript GLYMA12G09720.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213601443|gb|DB956721.1|DB956721
EST:     GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAG                         GCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
genomic: GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAGgtatgcttta ... atatcaacagGCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
EST: gi|15288064|gb|BI471955.1|BI471955
EST:     GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAG                         GCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
genomic: GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAGgtatgcttta ... atatcaacagGCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
EST: gi|31476111|gb|CD418139.1|CD418139
EST:     GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAG                         GCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
genomic: GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAGgtatgcttta ... atatcaacagGCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
EST: gi|192296222|gb|FG989763.1|FG989763
EST:     GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAG                         GCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
genomic: GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAGgtatgcttta ... atatcaacagGCGTTGCAGGACAGCAGCGCAAGACGCAAGAAACTGAACATGCTCAAATAT
EST: gi|5760499|gb|AI965862.1|AI965862
EST:     GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAG                         GCGTTGCAGGACAGCAGCGCAAGACGCAA
genomic: GGTTAACAGGTGACAATTCTCCACCAATAAACACGAAGGTGACTGCTAAGgtatgcttta ... atatcaacagGCGTTGCAGGACAGCAGCGCAAGACGCAA