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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGGGACCGTTGTTGGTTGTCGCATGTGGAAGAGATACCATTTCTACTGCAAGTTCCATAAAACGTTTAGCATCTGAGAATGTTTTTGTTGTTCAGgtttgcagacttcatgcatattattcttttatttaattttgctatgatatcttgtaaattatgcaattttggagtgtgtacttaaaaatttggaacaatc...

Basic information

species Glycine max
transcript GLYMA12G09690.1
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G09690.1 (Glycine max), 5'ss of exon 3
lower sequence: AT5G22350.1 (Arabidopsis thaliana), 5'ss of exon 3
GGAGGGACCGTTGTTGGTTGTCGCATGTGGAAGAGATACCATTTCTACTGCAAGTTCCATAAAACGTTTAGCATCTGAGAATGTTTTTGTTGTTCAGgt---ttgcagacttca---tgcatattattctt-ttatttaattttgctatgatatcttgtaaattatgcaattttggagtg--tgtacttaaaaatttggaacaatc
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GGATGGCCCGTTGATCGTGATTGCATGTGGAAGAGATACTATTTCTATTGCTAGCTCGATAAGACGTTTGGCTTCTGAAAACGTCTTCGTTGTTCAGgtctattataaaatttaacctgtttgttatgttagttattaaggcacagtagactaagctctgaa--atacaattcgagacaaactttacttagtatctttg-------