1 5' 3' | 2 5' 3' | 3 5' 3' |
TATTTGGGAAGAAGTCGCGTTCTGAATTTTCACATTTATGGAACAAAACTGTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATGgtagaaattttatgagtgattttatttttaatacaatctcttgtaattttgatttcaaaacatacaatacttggccttttattttttccttgacattcta...
species | Glycine max |
transcript | GLYMA12G07250.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATG GTTCCAGCTATATAGTEST: gi|208319162|gb|GE113323.1|GE113323
genomic: T-GGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATGgtagaaattt ... tgactttcagGTTCCAGCTATATAGT
EST: GTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATG GTTCCAGCTATATAGTTTACGGTACTAGEST: gi|208297438|gb|GE090553.1|GE090553
genomic: GTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATGgtagaaattt ... tgactttcagGTTCCAGCTATATAGTTTACGGTACTAG
EST: GTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATG GTTCCAGCTATATAGTTTACGGTACT
genomic: GTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATGgtagaaattt ... tgactttcagGTTCCAGCTATATAGTTTACGGTACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTTGGGAAGAAGTCGCGTTCTGAATTTTCACATTTATGGAACAAAACTGTGGATCAGACATTTGGACCTTTGATAAAGTCTCTCAGCTCACGTGGATGgtagaaattttatgagtgattttatttttaatacaatctcttgtaattttgatttcaaaacatacaatacttggccttttattttttccttgacattcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA